Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AC241585.3-202ENST00000628937 1088 ntBASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 AC245100.8-202ENST00000629247 1058 ntBASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 BICD1-207ENST00000551848 1962 ntBASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 AC139713.2-201ENST00000641328 2723 ntBASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRCH1Q9Y2L9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 PRORSD1P-202ENST00000563365 2154 ntBASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 UNC93B3-201ENST00000308076 687 ntBASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRCH1Q9Y2L9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LRCH1Q9Y2L9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRCH1Q9Y2L9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRCH1Q9Y2L9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRCH1Q9Y2L9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRCH1Q9Y2L9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 AC106739.1-201ENST00000617035 715 ntBASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LRCH1Q9Y2L9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 AL136162.1-201ENST00000607711 1078 ntBASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRCH1Q9Y2L9 AC135279.3-201ENST00000610945 1311 ntBASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 AC133637.1-201ENST00000624115 1537 ntBASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms