Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTI1BQ9UEU0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 AC087633.2-202ENST00000565166 1439 ntBASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VTI1BQ9UEU0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 AL162412.1-201ENST00000567129 965 ntBASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 AL591742.1-201ENST00000604433 565 ntBASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTI1BQ9UEU0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 AC068338.2-201ENST00000563278 1430 ntBASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTI1BQ9UEU0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTI1BQ9UEU0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms