Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.972e-6■■■□□ 17.5
DROSHAQ9NRR4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC36.57■■■■□ 3.452e-6■■■□□ 17.5
DROSHAQ9NRR4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC36.38■■■■□ 3.412e-6■■■□□ 17.5
DROSHAQ9NRR4 PHF23-204ENST00000570899 649 ntTSL 324.45■■□□□ 1.52e-6■■■□□ 17.5
DROSHAQ9NRR4 PHF23-213ENST00000613632 850 ntTSL 5 BASIC20.44■□□□□ 0.862e-6■■■□□ 17.5
DROSHAQ9NRR4 SYNJ2-206ENST00000485863 810 ntTSL 329.64■■■□□ 2.342e-6■■■□□ 17.5
DROSHAQ9NRR4 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC12.21□□□□□ -0.462e-6■■■□□ 17.5
DROSHAQ9NRR4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC27.46■■□□□ 1.991e-9■■■□□ 17.5
DROSHAQ9NRR4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.871e-9■■■□□ 17.5
DROSHAQ9NRR4 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.621e-9■■■□□ 17.5
DROSHAQ9NRR4 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC10.67□□□□□ -0.74e-8■■■□□ 17.5
DROSHAQ9NRR4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.824e-8■■■□□ 17.5
DROSHAQ9NRR4 FAM20C-203ENST00000477004 344 ntTSL 314.21□□□□□ -0.142e-6■■■□□ 17.5
DROSHAQ9NRR4 MICALL2-211ENST00000487156 874 ntTSL 529.77■■■□□ 2.361e-7■■■□□ 17.5
DROSHAQ9NRR4 RAB40C-207ENST00000563109 710 ntTSL 328.75■■■□□ 2.191e-6■■■□□ 17.4
DROSHAQ9NRR4 RAB40C-202ENST00000509637 565 ntTSL 325.39■■□□□ 1.651e-6■■■□□ 17.4
DROSHAQ9NRR4 TMEM37-204ENST00000465296 820 ntTSL 326.38■■□□□ 1.816e-10■■■□□ 17.4
DROSHAQ9NRR4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.86e-10■■■□□ 17.4
DROSHAQ9NRR4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC26.03■■□□□ 1.762e-6■■■□□ 17.4
DROSHAQ9NRR4 FMO5-205ENST00000527849 2410 ntTSL 525.23■■□□□ 1.632e-6■■■□□ 17.4
DROSHAQ9NRR4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC24.93■■□□□ 1.586e-10■■■□□ 17.4
DROSHAQ9NRR4 TMEM37-203ENST00000417645 522 ntTSL 323.21■■□□□ 1.316e-10■■■□□ 17.4
DROSHAQ9NRR4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.732e-6■■■□□ 17.4
DROSHAQ9NRR4 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC13.16□□□□□ -0.32e-6■■■□□ 17.4
DROSHAQ9NRR4 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC12.59□□□□□ -0.392e-6■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-214ENST00000548809 469 ntTSL 226.47■■□□□ 1.831e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-224ENST00000551154 423 ntTSL 223.68■■□□□ 1.381e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.021e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-223ENST00000550951 533 ntTSL 321.37■■□□□ 1.011e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-218ENST00000549445 759 ntTSL 317.74■□□□□ 0.431e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.371e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-208ENST00000547187 669 ntTSL 516.97■□□□□ 0.311e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.161e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-211ENST00000548201 582 ntTSL 413.62□□□□□ -0.231e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-220ENST00000549966 538 ntTSL 512.54□□□□□ -0.41e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-210ENST00000547832 640 ntTSL 311.35□□□□□ -0.591e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-204ENST00000546796 556 ntTSL 511.24□□□□□ -0.611e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-206ENST00000546914 521 ntTSL 411.17□□□□□ -0.621e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-226ENST00000552635 574 ntTSL 410.98□□□□□ -0.651e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-213ENST00000548713 551 ntTSL 410.62□□□□□ -0.711e-14■■■□□ 17.4
DROSHAQ9NRR4 TMBIM6-215ENST00000548894 373 ntTSL 48.14□□□□□ -1.111e-14■■■□□ 17.4
DROSHAQ9NRR4 SND1-209ENST00000470723 568 ntTSL 419.42■□□□□ 0.74e-6■■■□□ 17.4
DROSHAQ9NRR4 SND1-211ENST00000484767 460 ntTSL 413.29□□□□□ -0.284e-6■■■□□ 17.4
DROSHAQ9NRR4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC28.29■■■□□ 2.129e-8■■■□□ 17.4
DROSHAQ9NRR4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC26.06■■□□□ 1.769e-8■■■□□ 17.4
DROSHAQ9NRR4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.549e-8■■■□□ 17.4
DROSHAQ9NRR4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.429e-8■■■□□ 17.4
DROSHAQ9NRR4 TRMT112-205ENST00000539854 659 ntTSL 2 BASIC15.9■□□□□ 0.149e-8■■■□□ 17.4
DROSHAQ9NRR4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC26.16■■□□□ 1.782e-7■■■□□ 17.4
DROSHAQ9NRR4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.952e-7■■■□□ 17.4
DROSHAQ9NRR4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC44.62■■■■■ 4.732e-9■■■□□ 17.4
DROSHAQ9NRR4 TTC38-205ENST00000451998 582 ntTSL 224.27■■□□□ 1.482e-9■■■□□ 17.4
DROSHAQ9NRR4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.72e-9■■■□□ 17.4
DROSHAQ9NRR4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.514e-7■■■□□ 17.4
DROSHAQ9NRR4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.34■■■□□ 2.614e-7■■■□□ 17.4
DROSHAQ9NRR4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.74■■■□□ 2.514e-7■■■□□ 17.4
DROSHAQ9NRR4 RNASET2-204ENST00000421787 1924 ntTSL 230.6■■■□□ 2.494e-7■■■□□ 17.4
DROSHAQ9NRR4 RNASET2-201ENST00000028008 1220 ntTSL 528.19■■■□□ 2.14e-7■■■□□ 17.4
DROSHAQ9NRR4 RNASET2-207ENST00000478180 963 ntTSL 528.01■■■□□ 2.074e-7■■■□□ 17.4
DROSHAQ9NRR4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.734e-7■■■□□ 17.4
DROSHAQ9NRR4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.064e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-219ENST00000598962 580 ntTSL 431.18■■■□□ 2.583e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-224ENST00000602131 503 ntTSL 229.26■■■□□ 2.283e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-216ENST00000594085 503 ntTSL 229.26■■■□□ 2.283e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.013e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.93e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.823e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-218ENST00000596682 443 ntTSL 324.87■■□□□ 1.573e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-217ENST00000594908 804 ntTSL 324.87■■□□□ 1.573e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-222ENST00000600479 477 ntTSL 424.82■■□□□ 1.563e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-203ENST00000392032 873 ntTSL 524.03■■□□□ 1.443e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-223ENST00000600948 536 ntTSL 223.8■■□□□ 1.43e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.33e-7■■■□□ 17.4
DROSHAQ9NRR4 PLD3-221ENST00000599685 544 ntTSL 219.9■□□□□ 0.783e-7■■■□□ 17.4
DROSHAQ9NRR4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC44.94■■■■■ 4.788e-9■■■□□ 17.4
DROSHAQ9NRR4 COCH-208ENST00000555117 619 ntTSL 234.4■■■■□ 3.18e-9■■■□□ 17.4
DROSHAQ9NRR4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 38e-9■■■□□ 17.4
DROSHAQ9NRR4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.858e-9■■■□□ 17.4
DROSHAQ9NRR4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.818e-9■■■□□ 17.4
DROSHAQ9NRR4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC32.2■■■□□ 2.758e-9■■■□□ 17.4
DROSHAQ9NRR4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.35■■■□□ 2.618e-9■■■□□ 17.4
DROSHAQ9NRR4 COCH-206ENST00000553772 554 ntTSL 430.66■■■□□ 2.58e-9■■■□□ 17.4
DROSHAQ9NRR4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC29.68■■■□□ 2.348e-9■■■□□ 17.4
DROSHAQ9NRR4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.318e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.61■■■□□ 2.178e-9■■■□□ 17.4
DROSHAQ9NRR4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.51■■■□□ 2.158e-9■■■□□ 17.4
DROSHAQ9NRR4 PLA2G6-214ENST00000448094 1147 ntTSL 528.09■■■□□ 2.098e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-210ENST00000551888 636 ntTSL 227■■□□□ 1.918e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-207ENST00000550419 919 ntTSL 326.88■■□□□ 1.898e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-209ENST00000551800 773 ntTSL 526.78■■□□□ 1.888e-9■■■□□ 17.4
DROSHAQ9NRR4 NDUFB2-211ENST00000476181 660 ntTSL 1 (best)26.6■■□□□ 1.858e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-208ENST00000551706 984 ntTSL 1 (best)26.52■■□□□ 1.848e-9■■■□□ 17.4
DROSHAQ9NRR4 NDUFB2-205ENST00000464564 469 ntTSL 526.21■■□□□ 1.798e-9■■■□□ 17.4
DROSHAQ9NRR4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC25.98■■□□□ 1.758e-9■■■□□ 17.4
DROSHAQ9NRR4 PLA2G6-216ENST00000452794 781 ntTSL 425.58■■□□□ 1.698e-9■■■□□ 17.4
DROSHAQ9NRR4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.618e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-204ENST00000547281 825 ntTSL 325.03■■□□□ 1.68e-9■■■□□ 17.4
DROSHAQ9NRR4 GYS1-203ENST00000457974 718 ntTSL 324.72■■□□□ 1.558e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC24.52■■□□□ 1.528e-9■■■□□ 17.4
DROSHAQ9NRR4 CDK4-215ENST00000553237 952 ntTSL 224.5■■□□□ 1.518e-9■■■□□ 17.4
Retrieved 100 of 16,331 protein–RNA pairs in 71.1 ms