Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HINT3Q9NQE9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 KRT8P17-201ENST00000453110 1448 ntBASIC17.85■□□□□ 0.45
HINT3Q9NQE9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 AC016405.3-201ENST00000607710 860 ntBASIC17.85■□□□□ 0.45
HINT3Q9NQE9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HINT3Q9NQE9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 AC006970.2-201ENST00000450065 779 ntBASIC17.84■□□□□ 0.45
HINT3Q9NQE9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 AC013268.1-206ENST00000638368 961 ntBASIC17.84■□□□□ 0.45
HINT3Q9NQE9 AC112229.1-201ENST00000639295 961 ntBASIC17.84■□□□□ 0.45
HINT3Q9NQE9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.84■□□□□ 0.45
HINT3Q9NQE9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.84■□□□□ 0.45
HINT3Q9NQE9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HINT3Q9NQE9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HINT3Q9NQE9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.83■□□□□ 0.45
HINT3Q9NQE9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HINT3Q9NQE9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HINT3Q9NQE9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HINT3Q9NQE9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms