Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 AC013268.1-206ENST00000638368 961 ntBASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 AC112229.1-201ENST00000639295 961 ntBASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HDHD3Q9BSH5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 AC007322.4-201ENST00000509611 723 ntBASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 AL031963.3-201ENST00000606441 850 ntBASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 KRT16P6-202ENST00000425692 1426 ntBASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HDHD3Q9BSH5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 MCRIP2P1-201ENST00000394346 511 ntBASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.66■□□□□ 0.26
HDHD3Q9BSH5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms