Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS2Q99743 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.33■□□□□ 0.68
NPAS2Q99743 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.33■□□□□ 0.68
NPAS2Q99743 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
NPAS2Q99743 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS2Q99743 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NPAS2Q99743 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS2Q99743 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.33■□□□□ 0.68
NPAS2Q99743 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
NPAS2Q99743 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS2Q99743 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS2Q99743 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS2Q99743 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 TREX1-205ENST00000625293 1783 ntBASIC19.32■□□□□ 0.68
NPAS2Q99743 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.32■□□□□ 0.68
NPAS2Q99743 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.32■□□□□ 0.68
NPAS2Q99743 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS2Q99743 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS2Q99743 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS2Q99743 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NPAS2Q99743 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS2Q99743 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS2Q99743 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS2Q99743 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS2Q99743 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NPAS2Q99743 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NPAS2Q99743 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPAS2Q99743 SLC29A4P1-201ENST00000398760 971 ntBASIC19.31■□□□□ 0.68
NPAS2Q99743 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS2Q99743 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS2Q99743 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.31■□□□□ 0.68
NPAS2Q99743 AC098934.4-201ENST00000564127 592 ntBASIC19.31■□□□□ 0.68
NPAS2Q99743 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 AC016405.3-201ENST00000607710 860 ntBASIC19.31■□□□□ 0.68
NPAS2Q99743 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS2Q99743 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPAS2Q99743 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NPAS2Q99743 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPAS2Q99743 BX119927.1-201ENST00000636596 1552 ntBASIC19.31■□□□□ 0.68
NPAS2Q99743 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS2Q99743 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NPAS2Q99743 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NPAS2Q99743 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NPAS2Q99743 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS2Q99743 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NPAS2Q99743 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NPAS2Q99743 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS2Q99743 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS2Q99743 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS2Q99743 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NPAS2Q99743 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS2Q99743 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS2Q99743 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.3■□□□□ 0.68
NPAS2Q99743 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NPAS2Q99743 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NPAS2Q99743 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms