Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 AC135279.3-201ENST00000610945 1311 ntBASIC16.9■□□□□ 0.3
CITED4Q96RK1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CITED4Q96RK1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.89■□□□□ 0.3
CITED4Q96RK1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.89■□□□□ 0.29
CITED4Q96RK1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CITED4Q96RK1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.89■□□□□ 0.29
CITED4Q96RK1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CITED4Q96RK1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CITED4Q96RK1 UNC93B3-201ENST00000308076 687 ntBASIC16.89■□□□□ 0.29
CITED4Q96RK1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CITED4Q96RK1 AC093484.2-201ENST00000580996 2166 ntBASIC16.89■□□□□ 0.29
CITED4Q96RK1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 AP004607.7-201ENST00000527152 1677 ntBASIC16.88■□□□□ 0.29
CITED4Q96RK1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 SUDS3P1-201ENST00000505831 966 ntBASIC16.88■□□□□ 0.29
CITED4Q96RK1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.88■□□□□ 0.29
CITED4Q96RK1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 AC007225.1-201ENST00000566331 1836 ntBASIC16.88■□□□□ 0.29
CITED4Q96RK1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CITED4Q96RK1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.88■□□□□ 0.29
CITED4Q96RK1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 EDA-201ENST00000338901 1233 ntBASIC16.87■□□□□ 0.29
CITED4Q96RK1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 AL136162.1-201ENST00000607711 1078 ntBASIC16.87■□□□□ 0.29
CITED4Q96RK1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CITED4Q96RK1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.87■□□□□ 0.29
CITED4Q96RK1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CITED4Q96RK1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CITED4Q96RK1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CITED4Q96RK1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CITED4Q96RK1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CITED4Q96RK1 AC009053.2-201ENST00000563701 2365 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms