Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX5Q8N196 AL031133.1-201ENST00000406807 723 ntBASIC20.3■□□□□ 0.84
SIX5Q8N196 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.3■□□□□ 0.84
SIX5Q8N196 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.3■□□□□ 0.84
SIX5Q8N196 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIX5Q8N196 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIX5Q8N196 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.3■□□□□ 0.84
SIX5Q8N196 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.3■□□□□ 0.84
SIX5Q8N196 AL445675.2-201ENST00000620291 557 ntBASIC20.3■□□□□ 0.84
SIX5Q8N196 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.3■□□□□ 0.84
SIX5Q8N196 MIR2861-201ENST00000636310 90 ntBASIC20.3■□□□□ 0.84
SIX5Q8N196 MYC-208ENST00000641036 567 ntBASIC20.3■□□□□ 0.84
SIX5Q8N196 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SIX5Q8N196 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX5Q8N196 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SIX5Q8N196 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SIX5Q8N196 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.3■□□□□ 0.84
SIX5Q8N196 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SIX5Q8N196 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.29■□□□□ 0.84
SIX5Q8N196 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SIX5Q8N196 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SIX5Q8N196 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 FAM8A6P-201ENST00000407496 1135 ntBASIC20.29■□□□□ 0.84
SIX5Q8N196 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.29■□□□□ 0.84
SIX5Q8N196 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.29■□□□□ 0.84
SIX5Q8N196 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.29■□□□□ 0.84
SIX5Q8N196 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.29■□□□□ 0.84
SIX5Q8N196 C1QL1P1-201ENST00000568105 661 ntBASIC20.29■□□□□ 0.84
SIX5Q8N196 AC139887.4-201ENST00000607877 719 ntBASIC20.29■□□□□ 0.84
SIX5Q8N196 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.29■□□□□ 0.84
SIX5Q8N196 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX5Q8N196 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.29■□□□□ 0.84
SIX5Q8N196 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.28■□□□□ 0.84
SIX5Q8N196 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.28■□□□□ 0.84
SIX5Q8N196 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 RNF152P1-201ENST00000397754 604 ntBASIC20.28■□□□□ 0.84
SIX5Q8N196 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.28■□□□□ 0.84
SIX5Q8N196 KRT18P48-201ENST00000434763 852 ntBASIC20.28■□□□□ 0.84
SIX5Q8N196 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.28■□□□□ 0.84
SIX5Q8N196 AC009947.2-201ENST00000444014 672 ntBASIC20.28■□□□□ 0.84
SIX5Q8N196 AC011506.1-201ENST00000474329 610 ntBASIC20.28■□□□□ 0.84
SIX5Q8N196 AC091390.4-202ENST00000476426 537 ntBASIC20.28■□□□□ 0.84
SIX5Q8N196 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SIX5Q8N196 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX5Q8N196 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SIX5Q8N196 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.27■□□□□ 0.84
SIX5Q8N196 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.27■□□□□ 0.84
SIX5Q8N196 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SIX5Q8N196 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX5Q8N196 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX5Q8N196 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.27■□□□□ 0.84
SIX5Q8N196 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX5Q8N196 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX5Q8N196 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX5Q8N196 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX5Q8N196 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SIX5Q8N196 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
SIX5Q8N196 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.27■□□□□ 0.84
SIX5Q8N196 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.27■□□□□ 0.84
SIX5Q8N196 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.27■□□□□ 0.84
SIX5Q8N196 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIX5Q8N196 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.27■□□□□ 0.84
SIX5Q8N196 AP000550.4-202ENST00000639755 178 ntBASIC20.27■□□□□ 0.84
SIX5Q8N196 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
SIX5Q8N196 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.27■□□□□ 0.84
SIX5Q8N196 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIX5Q8N196 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIX5Q8N196 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIX5Q8N196 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.26■□□□□ 0.83
SIX5Q8N196 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.26■□□□□ 0.83
SIX5Q8N196 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.26■□□□□ 0.83
SIX5Q8N196 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
SIX5Q8N196 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 HMGA1P5-201ENST00000412453 271 ntBASIC20.26■□□□□ 0.83
SIX5Q8N196 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 AC092647.4-201ENST00000457211 535 ntBASIC20.26■□□□□ 0.83
SIX5Q8N196 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.26■□□□□ 0.83
SIX5Q8N196 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms