Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 AC136469.2-201ENST00000623944 1028 ntBASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 AC055733.4-201ENST00000638462 1354 ntBASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD2Q8IV50 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LYSMD2Q8IV50 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 AC067852.2-201ENST00000590513 2313 ntBASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 AL512631.2-201ENST00000604634 923 ntBASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 WIZP1-201ENST00000531444 2299 ntBASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD2Q8IV50 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms