Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ZNF546Q86UE3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF546Q86UE3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF546Q86UE3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 AP005435.1-201ENST00000529293 1178 ntBASIC16.44■□□□□ 0.22
ZNF546Q86UE3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ZNF546Q86UE3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 AL138724.1-201ENST00000606771 1088 ntBASIC16.43■□□□□ 0.22
ZNF546Q86UE3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ZNF546Q86UE3 BX119927.1-201ENST00000636596 1552 ntBASIC16.43■□□□□ 0.22
ZNF546Q86UE3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF546Q86UE3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.41■□□□□ 0.22
ZNF546Q86UE3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 MIR3621-201ENST00000580529 85 ntBASIC16.41■□□□□ 0.22
ZNF546Q86UE3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms