Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.09■□□□□ 0.49
CDC42P60953 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC42P60953 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC42P60953 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC42P60953 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC42P60953 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CDC42P60953 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDC42P60953 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.08■□□□□ 0.49
CDC42P60953 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CDC42P60953 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.08■□□□□ 0.49
CDC42P60953 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
CDC42P60953 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.08■□□□□ 0.49
CDC42P60953 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC42P60953 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC42P60953 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC42P60953 AF213884.3-201ENST00000563833 479 ntBASIC18.08■□□□□ 0.48
CDC42P60953 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.08■□□□□ 0.48
CDC42P60953 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.08■□□□□ 0.48
CDC42P60953 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC42P60953 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC42P60953 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC42P60953 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
CDC42P60953 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDC42P60953 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 IRS3P-201ENST00000223076 1006 ntBASIC18.07■□□□□ 0.48
CDC42P60953 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 AC097381.1-201ENST00000429019 1296 ntBASIC18.07■□□□□ 0.48
CDC42P60953 AC096631.2-201ENST00000436136 790 ntBASIC18.07■□□□□ 0.48
CDC42P60953 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.07■□□□□ 0.48
CDC42P60953 CDV3P1-201ENST00000471403 739 ntBASIC18.07■□□□□ 0.48
CDC42P60953 KRT18P20-201ENST00000548986 1279 ntBASIC18.07■□□□□ 0.48
CDC42P60953 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.07■□□□□ 0.48
CDC42P60953 AP001160.3-201ENST00000601484 763 ntBASIC18.07■□□□□ 0.48
CDC42P60953 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CDC42P60953 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC42P60953 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CDC42P60953 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDC42P60953 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.06■□□□□ 0.48
CDC42P60953 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC42P60953 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.06■□□□□ 0.48
CDC42P60953 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.06■□□□□ 0.48
CDC42P60953 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC42P60953 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CDC42P60953 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC42P60953 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDC42P60953 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC42P60953 RBM17P2-201ENST00000616397 1405 ntBASIC18.06■□□□□ 0.48
CDC42P60953 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC42P60953 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC42P60953 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDC42P60953 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDC42P60953 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDC42P60953 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms