Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.9■□□□□ 0.62
SSR2P43308 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.9■□□□□ 0.62
SSR2P43308 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.9■□□□□ 0.62
SSR2P43308 PNMA6B-201ENST00000538162 1200 ntBASIC18.9■□□□□ 0.62
SSR2P43308 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.9■□□□□ 0.62
SSR2P43308 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.9■□□□□ 0.62
SSR2P43308 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.9■□□□□ 0.62
SSR2P43308 AC006557.6-201ENST00000623071 864 ntBASIC18.9■□□□□ 0.62
SSR2P43308 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 AFG3L1P-217ENST00000557444 2447 ntBASIC18.9■□□□□ 0.62
SSR2P43308 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.89■□□□□ 0.62
SSR2P43308 PHGDH-210ENST00000641115 1638 ntBASIC18.89■□□□□ 0.62
SSR2P43308 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR2P43308 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.89■□□□□ 0.61
SSR2P43308 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SSR2P43308 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR2P43308 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.89■□□□□ 0.61
SSR2P43308 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR2P43308 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR2P43308 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR2P43308 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.89■□□□□ 0.61
SSR2P43308 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR2P43308 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.88■□□□□ 0.61
SSR2P43308 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SSR2P43308 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SSR2P43308 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SSR2P43308 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.88■□□□□ 0.61
SSR2P43308 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR2P43308 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.88■□□□□ 0.61
SSR2P43308 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.88■□□□□ 0.61
SSR2P43308 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.88■□□□□ 0.61
SSR2P43308 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.88■□□□□ 0.61
SSR2P43308 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.88■□□□□ 0.61
SSR2P43308 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.88■□□□□ 0.61
SSR2P43308 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SSR2P43308 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR2P43308 TMEM179-206ENST00000616017 1645 ntBASIC18.88■□□□□ 0.61
SSR2P43308 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SSR2P43308 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.88■□□□□ 0.61
SSR2P43308 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR2P43308 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR2P43308 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR2P43308 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR2P43308 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR2P43308 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SSR2P43308 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SSR2P43308 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.87■□□□□ 0.61
SSR2P43308 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SSR2P43308 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR2P43308 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR2P43308 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SSR2P43308 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SSR2P43308 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SSR2P43308 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SSR2P43308 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.86■□□□□ 0.61
SSR2P43308 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.86■□□□□ 0.61
SSR2P43308 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.86■□□□□ 0.61
SSR2P43308 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.86■□□□□ 0.61
SSR2P43308 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SSR2P43308 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.86■□□□□ 0.61
SSR2P43308 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR2P43308 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR2P43308 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR2P43308 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms