Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNCP24863 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNCP24863 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CCNCP24863 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCNCP24863 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNCP24863 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.2■□□□□ 0.82
CCNCP24863 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.2■□□□□ 0.82
CCNCP24863 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.2■□□□□ 0.82
CCNCP24863 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNCP24863 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCNCP24863 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNCP24863 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNCP24863 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNCP24863 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.19■□□□□ 0.82
CCNCP24863 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNCP24863 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNCP24863 KRT18P6-201ENST00000555540 1265 ntBASIC20.19■□□□□ 0.82
CCNCP24863 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNCP24863 TFP1-202ENST00000475455 1573 ntBASIC20.19■□□□□ 0.82
CCNCP24863 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCNCP24863 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNCP24863 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNCP24863 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.19■□□□□ 0.82
CCNCP24863 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCNCP24863 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNCP24863 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCNCP24863 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNCP24863 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 AC124283.5-201ENST00000624661 1809 ntBASIC20.18■□□□□ 0.82
CCNCP24863 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.18■□□□□ 0.82
CCNCP24863 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCNCP24863 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.18■□□□□ 0.82
CCNCP24863 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.18■□□□□ 0.82
CCNCP24863 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNCP24863 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCNCP24863 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCNCP24863 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.18■□□□□ 0.82
CCNCP24863 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNCP24863 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.18■□□□□ 0.82
CCNCP24863 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
CCNCP24863 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNCP24863 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNCP24863 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.17■□□□□ 0.82
CCNCP24863 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CCNCP24863 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCNCP24863 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCNCP24863 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.17■□□□□ 0.82
CCNCP24863 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNCP24863 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCNCP24863 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNCP24863 RNA5SP413-201ENST00000516373 109 ntBASIC20.17■□□□□ 0.82
CCNCP24863 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.17■□□□□ 0.82
CCNCP24863 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.17■□□□□ 0.82
CCNCP24863 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
CCNCP24863 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCNCP24863 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNCP24863 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNCP24863 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNCP24863 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNCP24863 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNCP24863 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNCP24863 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNCP24863 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNCP24863 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.16■□□□□ 0.82
CCNCP24863 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNCP24863 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNCP24863 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCNCP24863 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNCP24863 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCNCP24863 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNCP24863 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNCP24863 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNCP24863 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms