Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DPB1P04440 AC093503.3-201ENST00000624917 2352 ntBASIC17.76■□□□□ 0.43
HLA-DPB1P04440 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 HCG11-201ENST00000411553 5696 ntBASIC17.76■□□□□ 0.43
HLA-DPB1P04440 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.76■□□□□ 0.43
HLA-DPB1P04440 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPB1P04440 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 IKBKGP1-201ENST00000612193 1073 ntBASIC17.75■□□□□ 0.43
HLA-DPB1P04440 MYCNOS-205ENST00000641950 531 ntBASIC17.75■□□□□ 0.43
HLA-DPB1P04440 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPB1P04440 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPB1P04440 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms