Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TCRAP04437 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.06■□□□□ 0
TCRAP04437 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TCRAP04437 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TCRAP04437 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.06■□□□□ 0
TCRAP04437 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.06■□□□□ 0
TCRAP04437 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.06■□□□□ 0
TCRAP04437 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.06■□□□□ 0
TCRAP04437 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.06■□□□□ 0
TCRAP04437 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.06■□□□□ 0
TCRAP04437 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.06■□□□□ 0
TCRAP04437 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.06■□□□□ 0
TCRAP04437 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.05■□□□□ 0
TCRAP04437 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TCRAP04437 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TCRAP04437 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TCRAP04437 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TCRAP04437 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.05■□□□□ 0
TCRAP04437 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TCRAP04437 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.05■□□□□ 0
TCRAP04437 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TCRAP04437 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 SLC7A5P1-201ENST00000568957 537 ntBASIC15.05■□□□□ -0
TCRAP04437 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.05■□□□□ -0
TCRAP04437 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.05■□□□□ -0
TCRAP04437 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 AC087633.2-202ENST00000565166 1439 ntBASIC15.05■□□□□ -0
TCRAP04437 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.05■□□□□ -0
TCRAP04437 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TCRAP04437 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TCRAP04437 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRAP04437 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 NEFHP1-201ENST00000412845 2629 ntBASIC15.04■□□□□ -0
TCRAP04437 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TCRAP04437 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.04■□□□□ -0
TCRAP04437 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.04■□□□□ -0
TCRAP04437 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TCRAP04437 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.04■□□□□ -0
TCRAP04437 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TCRAP04437 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.04■□□□□ -0
TCRAP04437 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TCRAP04437 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.04■□□□□ -0
TCRAP04437 AL031432.3-201ENST00000607698 485 ntBASIC15.04■□□□□ -0
TCRAP04437 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TCRAP04437 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.04■□□□□ -0
TCRAP04437 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRAP04437 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TCRAP04437 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRAP04437 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TCRAP04437 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TCRAP04437 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TCRAP04437 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRAP04437 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms