Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 CCDC92B-201ENST00000575506 885 ntBASIC16.16■□□□□ 0.18
SCAF4O95104 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.16■□□□□ 0.18
SCAF4O95104 TPRG1LP1-201ENST00000598702 760 ntBASIC16.16■□□□□ 0.18
SCAF4O95104 MIR5787-201ENST00000611784 55 ntBASIC16.16■□□□□ 0.18
SCAF4O95104 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.16■□□□□ 0.18
SCAF4O95104 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SCAF4O95104 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.16■□□□□ 0.18
SCAF4O95104 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.16■□□□□ 0.18
SCAF4O95104 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.16■□□□□ 0.18
SCAF4O95104 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SCAF4O95104 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.15■□□□□ 0.18
SCAF4O95104 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAF4O95104 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAF4O95104 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 KRT16P2-201ENST00000414673 1423 ntBASIC16.15■□□□□ 0.18
SCAF4O95104 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAF4O95104 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAF4O95104 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAF4O95104 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.15■□□□□ 0.18
SCAF4O95104 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.15■□□□□ 0.18
SCAF4O95104 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAF4O95104 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCAF4O95104 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.14■□□□□ 0.18
SCAF4O95104 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SCAF4O95104 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
SCAF4O95104 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 AC093503.3-201ENST00000624917 2352 ntBASIC16.14■□□□□ 0.17
SCAF4O95104 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 AC061975.6-201ENST00000579045 1553 ntBASIC16.14■□□□□ 0.17
SCAF4O95104 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.14■□□□□ 0.17
SCAF4O95104 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAF4O95104 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAF4O95104 AC116050.2-201ENST00000612102 1779 ntBASIC16.14■□□□□ 0.17
SCAF4O95104 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.14■□□□□ 0.17
SCAF4O95104 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 KRT18P14-201ENST00000534205 1250 ntBASIC16.14■□□□□ 0.17
SCAF4O95104 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.14■□□□□ 0.17
SCAF4O95104 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.14■□□□□ 0.17
SCAF4O95104 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAF4O95104 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAF4O95104 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAF4O95104 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAF4O95104 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAF4O95104 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCAF4O95104 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SCAF4O95104 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAF4O95104 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms