Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FAM197Y1-201ENST00000421178 764 ntBASIC19.65■□□□□ 0.74
PCDHGA12O60330 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA12O60330 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA12O60330 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA12O60330 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 RN7SL850P-201ENST00000579959 291 ntBASIC19.64■□□□□ 0.73
PCDHGA12O60330 AC145285.6-201ENST00000604632 637 ntBASIC19.64■□□□□ 0.73
PCDHGA12O60330 AL445228.2-201ENST00000605589 952 ntBASIC19.64■□□□□ 0.73
PCDHGA12O60330 AC004264.1-201ENST00000608354 794 ntBASIC19.64■□□□□ 0.73
PCDHGA12O60330 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA12O60330 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA12O60330 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA12O60330 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA12O60330 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA12O60330 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA12O60330 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA12O60330 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA12O60330 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA12O60330 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PCDHGA12O60330 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA12O60330 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA12O60330 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA12O60330 AC092865.7-201ENST00000641832 219 ntBASIC19.63■□□□□ 0.73
PCDHGA12O60330 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA12O60330 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA12O60330 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHGA12O60330 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA12O60330 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 KRT8P36-201ENST00000489121 1440 ntBASIC19.62■□□□□ 0.73
PCDHGA12O60330 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 NUDT16P1-203ENST00000513809 620 ntBASIC19.62■□□□□ 0.73
PCDHGA12O60330 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA12O60330 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA12O60330 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 AC124283.5-201ENST00000624661 1809 ntBASIC19.61■□□□□ 0.73
PCDHGA12O60330 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 RBM17P1-201ENST00000453646 1190 ntBASIC19.61■□□□□ 0.73
PCDHGA12O60330 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 AC027702.1-201ENST00000563810 1770 ntBASIC19.61■□□□□ 0.73
PCDHGA12O60330 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA12O60330 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA12O60330 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 LINC01006-201ENST00000333319 2292 ntBASIC19.6■□□□□ 0.73
PCDHGA12O60330 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms