Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPN9O14815 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.88■□□□□ 0.93
CAPN9O14815 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CAPN9O14815 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN9O14815 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN9O14815 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN9O14815 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN9O14815 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.87■□□□□ 0.93
CAPN9O14815 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.87■□□□□ 0.93
CAPN9O14815 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 ESRRAP1-201ENST00000400596 1257 ntBASIC20.87■□□□□ 0.93
CAPN9O14815 AC026366.1-201ENST00000488803 879 ntBASIC20.87■□□□□ 0.93
CAPN9O14815 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 AC008687.6-201ENST00000596318 630 ntBASIC20.87■□□□□ 0.93
CAPN9O14815 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CAPN9O14815 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN9O14815 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN9O14815 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.86■□□□□ 0.93
CAPN9O14815 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CAPN9O14815 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CAPN9O14815 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 BX119927.1-201ENST00000636596 1552 ntBASIC20.86■□□□□ 0.93
CAPN9O14815 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CAPN9O14815 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 TSPY20P-201ENST00000450910 630 ntBASIC20.86■□□□□ 0.93
CAPN9O14815 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.86■□□□□ 0.93
CAPN9O14815 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.86■□□□□ 0.93
CAPN9O14815 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.86■□□□□ 0.93
CAPN9O14815 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.86■□□□□ 0.93
CAPN9O14815 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN9O14815 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CAPN9O14815 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CAPN9O14815 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.85■□□□□ 0.93
CAPN9O14815 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CAPN9O14815 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CAPN9O14815 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.85■□□□□ 0.93
CAPN9O14815 FAM201B-201ENST00000458407 597 ntBASIC20.85■□□□□ 0.93
CAPN9O14815 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN9O14815 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.85■□□□□ 0.93
CAPN9O14815 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 AC120498.8-201ENST00000614275 531 ntBASIC20.85■□□□□ 0.93
CAPN9O14815 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.85■□□□□ 0.93
CAPN9O14815 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN9O14815 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CAPN9O14815 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CAPN9O14815 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN9O14815 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.84■□□□□ 0.93
CAPN9O14815 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.84■□□□□ 0.93
CAPN9O14815 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.84■□□□□ 0.93
CAPN9O14815 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.84■□□□□ 0.93
CAPN9O14815 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.84■□□□□ 0.93
CAPN9O14815 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms