Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCP4L1A6NKN8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCP4L1A6NKN8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PCP4L1A6NKN8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 OXCT2P1-201ENST00000447263 1535 ntBASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCP4L1A6NKN8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 AC008741.2-201ENST00000612792 3115 ntBASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 AL161729.1-201ENST00000604104 1402 ntBASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCP4L1A6NKN8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 FLJ16779-201ENST00000612722 7638 ntBASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 AC020907.5-201ENST00000624372 1936 ntBASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCP4L1A6NKN8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCP4L1A6NKN8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms