Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC093827.2-201ENST00000512654 315 ntBASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PNMA6B-201ENST00000538162 1200 ntBASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC142381.4-202ENST00000563973 229 ntBASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AP006294.2-201ENST00000641667 209 ntBASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC073648.6-201ENST00000641589 218 ntBASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC087633.2-202ENST00000565166 1439 ntBASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 KRT17P3-201ENST00000420566 1262 ntBASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 C2orf69P4-201ENST00000565394 541 ntBASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV4S1A1TA0A5B7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SMG8-203ENST00000578922 2178 ntBASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms