Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 EFTUD2-212ENST00000589211 584 ntTSL 46.93□□□□□ -1.34e-8■□□□□ 9.1
PRPF8Q6P2Q9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.494e-8■□□□□ 9.1
PRPF8Q6P2Q9 SAMD5-202ENST00000566741 393 ntTSL 35.02□□□□□ -1.614e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.644e-8■□□□□ 9.1
PRPF8Q6P2Q9 FAT1-206ENST00000508035 341 ntTSL 23.21□□□□□ -1.94e-8■□□□□ 9.1
PRPF8Q6P2Q9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.72□□□□□ -1.974e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-210ENST00000557346 663 ntTSL 31.84□□□□□ -2.124e-8■□□□□ 9.1
PRPF8Q6P2Q9 AL033504.1-202ENST00000432506 406 ntTSL 21.35□□□□□ -2.194e-8■□□□□ 9.1
PRPF8Q6P2Q9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.89□□□□□ -2.274e-8■□□□□ 9.1
PRPF8Q6P2Q9 AL033504.1-203ENST00000442094 404 ntTSL 30.26□□□□□ -2.374e-8■□□□□ 9.1
PRPF8Q6P2Q9 HGFAC-203ENST00000509689 1894 ntTSL 516.39■□□□□ 0.215e-7■□□□□ 9.1
PRPF8Q6P2Q9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.34■□□□□ 0.055e-7■□□□□ 9.1
PRPF8Q6P2Q9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.25e-7■□□□□ 9.1
PRPF8Q6P2Q9 FECH-205ENST00000585747 564 ntTSL 417.54■□□□□ 0.45e-7■□□□□ 9.1
PRPF8Q6P2Q9 FECH-204ENST00000585699 512 ntTSL 414.24□□□□□ -0.135e-7■□□□□ 9.1
PRPF8Q6P2Q9 FECH-206ENST00000585878 622 ntTSL 412.46□□□□□ -0.415e-7■□□□□ 9.1
PRPF8Q6P2Q9 FECH-209ENST00000592111 556 ntTSL 211.96□□□□□ -0.495e-7■□□□□ 9.1
PRPF8Q6P2Q9 FECH-207ENST00000591215 590 ntTSL 510.04□□□□□ -0.85e-7■□□□□ 9.1
PRPF8Q6P2Q9 NPM2-206ENST00000520125 570 ntTSL 513.5□□□□□ -0.251e-6■□□□□ 9.1
PRPF8Q6P2Q9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.167e-11■□□□□ 9.1
PRPF8Q6P2Q9 UQCRQ-204ENST00000480372 509 ntTSL 215.31■□□□□ 0.047e-11■□□□□ 9.1
PRPF8Q6P2Q9 UQCRQ-206ENST00000498309 874 ntTSL 213.39□□□□□ -0.277e-11■□□□□ 9.1
PRPF8Q6P2Q9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.447e-11■□□□□ 9.1
PRPF8Q6P2Q9 UQCRQ-202ENST00000378667 429 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.037e-11■□□□□ 9.1
PRPF8Q6P2Q9 UQCRQ-205ENST00000496429 258 ntTSL 26.72□□□□□ -1.337e-11■□□□□ 9.1
PRPF8Q6P2Q9 CNTROB-208ENST00000573862 808 ntTSL 214.38□□□□□ -0.117e-8■□□□□ 9.1
PRPF8Q6P2Q9 HMBS-219ENST00000544182 1542 ntTSL 210.86□□□□□ -0.671e-8■□□□□ 9.1
PRPF8Q6P2Q9 SERGEF-215ENST00000530951 408 ntTSL 37.66□□□□□ -1.185e-7■□□□□ 9.1
PRPF8Q6P2Q9 CD55-211ENST00000635614 1145 ntTSL 58.85□□□□□ -0.991e-8■□□□□ 9.1
PRPF8Q6P2Q9 CD55-207ENST00000465534 1480 ntTSL 1 (best)3.04□□□□□ -1.921e-8■□□□□ 9.1
PRPF8Q6P2Q9 CD55-208ENST00000476590 2163 ntTSL 1 (best)2.38□□□□□ -2.031e-8■□□□□ 9.1
PRPF8Q6P2Q9 CD55-210ENST00000634386 951 ntTSL 5-1.96□□□□□ -2.721e-8■□□□□ 9.1
PRPF8Q6P2Q9 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.674e-7■□□□□ 9.1
PRPF8Q6P2Q9 COL4A5-206ENST00000489230 737 ntTSL 510.29□□□□□ -0.767e-7■□□□□ 9.1
PRPF8Q6P2Q9 STK11-202ENST00000585465 3554 ntTSL 511.11□□□□□ -0.632e-16■□□□□ 9.1
PRPF8Q6P2Q9 GUCD1-205ENST00000407973 773 ntTSL 319.94■□□□□ 0.781e-6■□□□□ 9.1
PRPF8Q6P2Q9 GUCD1-208ENST00000468170 619 ntTSL 216.7■□□□□ 0.261e-6■□□□□ 9.1
PRPF8Q6P2Q9 GUCD1-210ENST00000490810 346 ntTSL 29.25□□□□□ -0.931e-6■□□□□ 9.1
PRPF8Q6P2Q9 MGEA5-204ENST00000429860 769 ntTSL 38.47□□□□□ -1.051e-14■□□□□ 9.1
PRPF8Q6P2Q9 FAM173A-205ENST00000566525 1686 ntTSL 220.42■□□□□ 0.862e-6■□□□□ 9.1
PRPF8Q6P2Q9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.832e-6■□□□□ 9.1
PRPF8Q6P2Q9 FAM173A-203ENST00000564640 908 ntTSL 220.18■□□□□ 0.822e-6■□□□□ 9.1
PRPF8Q6P2Q9 FAM173A-204ENST00000566437 800 ntTSL 319.8■□□□□ 0.762e-6■□□□□ 9.1
PRPF8Q6P2Q9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.762e-6■□□□□ 9.1
PRPF8Q6P2Q9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.722e-6■□□□□ 9.1
PRPF8Q6P2Q9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.98■□□□□ 0.472e-6■□□□□ 9.1
PRPF8Q6P2Q9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.312e-6■□□□□ 9.1
PRPF8Q6P2Q9 PPCS-207ENST00000472013 1617 ntTSL 1 (best)14.78□□□□□ -0.042e-6■□□□□ 9.1
PRPF8Q6P2Q9 PPCS-206ENST00000471420 641 ntTSL 213.33□□□□□ -0.282e-6■□□□□ 9.1
PRPF8Q6P2Q9 PPCS-208ENST00000482168 688 ntTSL 26.64□□□□□ -1.352e-6■□□□□ 9.1
PRPF8Q6P2Q9 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.59□□□□□ -1.352e-6■□□□□ 9.1
PRPF8Q6P2Q9 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.34□□□□□ -1.552e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.54■□□□□ 0.565e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.87■□□□□ 0.135e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-209ENST00000558313 1088 ntTSL 511.32□□□□□ -0.65e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.675e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-221ENST00000561163 1643 ntTSL 210.09□□□□□ -0.795e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-205ENST00000397624 2748 ntTSL 5 BASIC8.56□□□□□ -1.045e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC8.37□□□□□ -1.075e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-222ENST00000561208 4822 ntTSL 1 (best) BASIC8.37□□□□□ -1.075e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-217ENST00000560570 2321 ntTSL 28.04□□□□□ -1.125e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-201ENST00000314177 2775 ntTSL 27.47□□□□□ -1.215e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC7.38□□□□□ -1.235e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC7.2□□□□□ -1.265e-6■□□□□ 9.1
PRPF8Q6P2Q9 MEIS2-206ENST00000424352 2917 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.275e-6■□□□□ 9.1
PRPF8Q6P2Q9 PACSIN3-205ENST00000528462 1560 ntTSL 218.2■□□□□ 0.55e-7■□□□□ 9.1
PRPF8Q6P2Q9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.175e-7■□□□□ 9.1
PRPF8Q6P2Q9 HSF1-214ENST00000614796 1724 ntTSL 515.65■□□□□ 0.13e-6■□□□□ 9.1
PRPF8Q6P2Q9 BCAR1-216ENST00000564170 552 ntTSL 417.96■□□□□ 0.472e-9■□□□□ 9.1
PRPF8Q6P2Q9 FUOM-205ENST00000465384 867 ntTSL 216.99■□□□□ 0.319e-8■□□□□ 9.1
PRPF8Q6P2Q9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.38■□□□□ 0.219e-8■□□□□ 9.1
PRPF8Q6P2Q9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.99■□□□□ 0.154e-6■□□□□ 9.1
PRPF8Q6P2Q9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.099e-8■□□□□ 9.1
PRPF8Q6P2Q9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.67□□□□□ -0.069e-8■□□□□ 9.1
PRPF8Q6P2Q9 FUOM-204ENST00000447176 590 ntTSL 212.36□□□□□ -0.439e-8■□□□□ 9.1
PRPF8Q6P2Q9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.12□□□□□ -0.474e-6■□□□□ 9.1
PRPF8Q6P2Q9 RNF213-209ENST00000559864 594 ntTSL 38.41□□□□□ -1.062e-9■□□□□ 9.1
PRPF8Q6P2Q9 ARMC8-219ENST00000486832 3095 ntTSL 24.61□□□□□ -1.672e-9■□□□□ 9.1
PRPF8Q6P2Q9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.041e-8■□□□□ 9.1
PRPF8Q6P2Q9 PECR-202ENST00000442122 1100 ntTSL 211.63□□□□□ -0.554e-6■□□□□ 9.1
PRPF8Q6P2Q9 CHD2-206ENST00000625990 888 ntTSL 57.58□□□□□ -1.27e-7■□□□□ 9.1
PRPF8Q6P2Q9 CDC42EP1-203ENST00000430687 720 ntAPPRIS ALT2 TSL 314.87□□□□□ -0.031e-9■□□□□ 9.1
PRPF8Q6P2Q9 ENOSF1-220ENST00000584706 616 ntTSL 38.42□□□□□ -1.063e-13■□□□□ 9
PRPF8Q6P2Q9 ENOSF1-205ENST00000578647 706 ntTSL 34.96□□□□□ -1.613e-13■□□□□ 9
PRPF8Q6P2Q9 SCARNA16-201ENST00000515981 187 ntBASIC8.15□□□□□ -1.15e-37■□□□□ 9
PRPF8Q6P2Q9 SRC-210ENST00000493775 559 ntTSL 413.88□□□□□ -0.196e-9■□□□□ 9
PRPF8Q6P2Q9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.029e-11■□□□□ 9
PRPF8Q6P2Q9 RWDD3-205ENST00000492639 549 ntTSL 314.31□□□□□ -0.129e-11■□□□□ 9
PRPF8Q6P2Q9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.28□□□□□ -0.129e-11■□□□□ 9
PRPF8Q6P2Q9 BANP-221ENST00000497491 739 ntTSL 511.78□□□□□ -0.529e-11■□□□□ 9
PRPF8Q6P2Q9 RWDD3-206ENST00000495272 1294 ntTSL 511.21□□□□□ -0.629e-11■□□□□ 9
PRPF8Q6P2Q9 RWDD3-204ENST00000473397 513 ntTSL 310.45□□□□□ -0.749e-11■□□□□ 9
PRPF8Q6P2Q9 RWDD3-207ENST00000497058 796 ntTSL 210.17□□□□□ -0.789e-11■□□□□ 9
PRPF8Q6P2Q9 HGS-203ENST00000570652 523 ntTSL 516.56■□□□□ 0.242e-8■□□□□ 9
PRPF8Q6P2Q9 TTC14-206ENST00000465625 758 ntTSL 3-0.17□□□□□ -2.445e-17■□□□□ 9
PRPF8Q6P2Q9 DENND5A-215ENST00000532696 832 ntTSL 25.67□□□□□ -1.52e-6■□□□□ 9
PRPF8Q6P2Q9 CCDC85C-206ENST00000557576 656 ntTSL 213.66□□□□□ -0.224e-7■□□□□ 9
PRPF8Q6P2Q9 CCDC85C-202ENST00000554877 543 ntTSL 410.44□□□□□ -0.744e-7■□□□□ 9
PRPF8Q6P2Q9 CCDC85C-205ENST00000556348 556 ntTSL 510.11□□□□□ -0.794e-7■□□□□ 9
PRPF8Q6P2Q9 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.854e-7■□□□□ 9
Retrieved 100 of 73,762 protein–RNA pairs in 470 ms