RNA–Protein interactions for RNA: ENST00000340545.9

MEIS2-203, Transcript of Meis homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene MEIS2, Length 3,056 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS2-203ENST00000340545 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
MEIS2-203ENST00000340545 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
MEIS2-203ENST00000340545 ZCCHC6Q5VYS8 1495 aaKnown RBP17.47■□□□□ 0.39
MEIS2-203ENST00000340545 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
MEIS2-203ENST00000340545 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
MEIS2-203ENST00000340545 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
MEIS2-203ENST00000340545 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
MEIS2-203ENST00000340545 MYO15BQ96JP2 1530 aa16.59■□□□□ 0.25
MEIS2-203ENST00000340545 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
MEIS2-203ENST00000340545 ABCC9O60706 1549 aa16.52■□□□□ 0.23
MEIS2-203ENST00000340545 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
MEIS2-203ENST00000340545 NACADO15069 1562 aa16.24■□□□□ 0.19
MEIS2-203ENST00000340545 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
MEIS2-203ENST00000340545 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
MEIS2-203ENST00000340545 HRCP23327 699 aa16.14■□□□□ 0.17
MEIS2-203ENST00000340545 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
MEIS2-203ENST00000340545 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
MEIS2-203ENST00000340545 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
MEIS2-203ENST00000340545 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
MEIS2-203ENST00000340545 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
MEIS2-203ENST00000340545 WIZO95785 1651 aa15.89■□□□□ 0.14
MEIS2-203ENST00000340545 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
MEIS2-203ENST00000340545 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.13
MEIS2-203ENST00000340545 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
MEIS2-203ENST00000340545 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.11
MEIS2-203ENST00000340545 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
MEIS2-203ENST00000340545 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
MEIS2-203ENST00000340545 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
MEIS2-203ENST00000340545 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
MEIS2-203ENST00000340545 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.08
MEIS2-203ENST00000340545 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
MEIS2-203ENST00000340545 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
MEIS2-203ENST00000340545 BICRAQ9NZM4 1560 aa15.5■□□□□ 0.07
MEIS2-203ENST00000340545 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
MEIS2-203ENST00000340545 ABCC8Q09428 1581 aa15.48■□□□□ 0.07
MEIS2-203ENST00000340545 EEA1Q15075 1411 aa15.38■□□□□ 0.05
MEIS2-203ENST00000340545 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
MEIS2-203ENST00000340545 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
MEIS2-203ENST00000340545 SOGA1O94964 1423 aa15.3■□□□□ 0.04
MEIS2-203ENST00000340545 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
MEIS2-203ENST00000340545 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
MEIS2-203ENST00000340545 ATAD2BQ9ULI0 1458 aa15.23■□□□□ 0.03
MEIS2-203ENST00000340545 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
MEIS2-203ENST00000340545 KIF21BO75037 1637 aa15.22■□□□□ 0.03
MEIS2-203ENST00000340545 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
MEIS2-203ENST00000340545 RUSC2Q8N2Y8 1516 aa15.22■□□□□ 0.03
MEIS2-203ENST00000340545 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
MEIS2-203ENST00000340545 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
MEIS2-203ENST00000340545 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
MEIS2-203ENST00000340545 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
MEIS2-203ENST00000340545 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
MEIS2-203ENST00000340545 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
MEIS2-203ENST00000340545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
MEIS2-203ENST00000340545 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
MEIS2-203ENST00000340545 HMGXB3Q12766 1538 aa15.05■□□□□ -0
MEIS2-203ENST00000340545 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
MEIS2-203ENST00000340545 CLIP1P30622 1438 aa14.99□□□□□ -0.01
MEIS2-203ENST00000340545 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
MEIS2-203ENST00000340545 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
MEIS2-203ENST00000340545 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
MEIS2-203ENST00000340545 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
MEIS2-203ENST00000340545 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
MEIS2-203ENST00000340545 PRXQ9BXM0 1461 aa14.9□□□□□ -0.02
MEIS2-203ENST00000340545 TTBK1Q5TCY1 1321 aaPredicted RBP14.89□□□□□ -0.03
MEIS2-203ENST00000340545 CUX1P39880 1505 aa14.88□□□□□ -0.03
MEIS2-203ENST00000340545 CFTRP13569 1480 aa14.85□□□□□ -0.03
MEIS2-203ENST00000340545 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
MEIS2-203ENST00000340545 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
MEIS2-203ENST00000340545 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
MEIS2-203ENST00000340545 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
MEIS2-203ENST00000340545 APLP2Q06481 763 aa14.74□□□□□ -0.05
MEIS2-203ENST00000340545 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
MEIS2-203ENST00000340545 ACIN1Q9UKV3 1341 aaKnown RBP14.72□□□□□ -0.05
MEIS2-203ENST00000340545 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
MEIS2-203ENST00000340545 RRBP1Q9P2E9 1410 aaKnown RBP14.67□□□□□ -0.06
MEIS2-203ENST00000340545 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
MEIS2-203ENST00000340545 CLSPNQ9HAW4 1339 aa14.65□□□□□ -0.06
MEIS2-203ENST00000340545 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
MEIS2-203ENST00000340545 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
MEIS2-203ENST00000340545 CUX2O14529 1486 aa14.64□□□□□ -0.07
MEIS2-203ENST00000340545 CENPBP07199 599 aaPredicted RBP14.64□□□□□ -0.07
MEIS2-203ENST00000340545 MAP3K1Q13233 1512 aa14.62□□□□□ -0.07
MEIS2-203ENST00000340545 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
MEIS2-203ENST00000340545 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
MEIS2-203ENST00000340545 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
MEIS2-203ENST00000340545 FGD5Q6ZNL6 1462 aa14.58□□□□□ -0.08
MEIS2-203ENST00000340545 IGF1RP08069 1367 aa14.58□□□□□ -0.08
MEIS2-203ENST00000340545 KANK4Q5T7N3 995 aaPredicted RBP14.57□□□□□ -0.08
MEIS2-203ENST00000340545 TIAM1Q13009 1591 aa14.56□□□□□ -0.08
MEIS2-203ENST00000340545 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
MEIS2-203ENST00000340545 CFAP43Q8NDM7 1665 aa14.54□□□□□ -0.08
MEIS2-203ENST00000340545 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.08
MEIS2-203ENST00000340545 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.09
MEIS2-203ENST00000340545 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
MEIS2-203ENST00000340545 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
MEIS2-203ENST00000340545 GTF3C3Q9Y5Q9 886 aa14.48□□□□□ -0.09
MEIS2-203ENST00000340545 CUL7Q14999 1698 aa14.47□□□□□ -0.09
MEIS2-203ENST00000340545 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
MEIS2-203ENST00000340545 LRRC9Q6ZRR7 1453 aa14.46□□□□□ -0.09
MEIS2-203ENST00000340545 MIER1Q8N108 512 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms