Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN6Q9Y6Q1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CAPN6Q9Y6Q1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CAPN6Q9Y6Q1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.02■□□□□ 0.95
CAPN6Q9Y6Q1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 AL031963.3-201ENST00000606441 850 ntBASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
CAPN6Q9Y6Q1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 NEFHP1-201ENST00000412845 2629 ntBASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN6Q9Y6Q1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 AP001271.2-201ENST00000624018 1556 ntBASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 KRT16P6-202ENST00000425692 1426 ntBASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN6Q9Y6Q1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN6Q9Y6Q1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CAPN6Q9Y6Q1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms