Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 TFP1-202ENST00000475455 1573 ntBASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 UNC93B4-201ENST00000505679 747 ntBASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 AC008687.6-201ENST00000596318 630 ntBASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 AC124283.5-201ENST00000624661 1809 ntBASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGC3Q9UN70 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.95■□□□□ 0.95
PCDHGC3Q9UN70 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.95
PCDHGC3Q9UN70 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.95■□□□□ 0.95
PCDHGC3Q9UN70 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGC3Q9UN70 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 KRT18P6-201ENST00000555540 1265 ntBASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGC3Q9UN70 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 TREX1-205ENST00000625293 1783 ntBASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms