Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 KRT8P20-201ENST00000423953 1409 ntBASIC21.77■■□□□ 1.08
VPS16Q9H269 KRT16P6-202ENST00000425692 1426 ntBASIC21.77■■□□□ 1.08
VPS16Q9H269 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
VPS16Q9H269 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VPS16Q9H269 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS16Q9H269 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
VPS16Q9H269 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.77■■□□□ 1.07
VPS16Q9H269 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.77■■□□□ 1.07
VPS16Q9H269 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.77■■□□□ 1.07
VPS16Q9H269 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.77■■□□□ 1.07
VPS16Q9H269 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS16Q9H269 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VPS16Q9H269 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.76■■□□□ 1.07
VPS16Q9H269 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
VPS16Q9H269 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 AC026271.2-201ENST00000428091 497 ntBASIC21.76■■□□□ 1.07
VPS16Q9H269 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS16Q9H269 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.76■■□□□ 1.07
VPS16Q9H269 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS16Q9H269 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.76■■□□□ 1.07
VPS16Q9H269 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VPS16Q9H269 BX323043.1-201ENST00000641006 1765 ntBASIC21.76■■□□□ 1.07
VPS16Q9H269 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS16Q9H269 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS16Q9H269 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
VPS16Q9H269 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS16Q9H269 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
VPS16Q9H269 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
VPS16Q9H269 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.75■■□□□ 1.07
VPS16Q9H269 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.75■■□□□ 1.07
VPS16Q9H269 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.75■■□□□ 1.07
VPS16Q9H269 CYP2T3P-201ENST00000601990 817 ntBASIC21.75■■□□□ 1.07
VPS16Q9H269 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.75■■□□□ 1.07
VPS16Q9H269 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.75■■□□□ 1.07
VPS16Q9H269 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VPS16Q9H269 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS16Q9H269 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
VPS16Q9H269 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
VPS16Q9H269 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS16Q9H269 AC006015.1-201ENST00000429970 570 ntBASIC21.74■■□□□ 1.07
VPS16Q9H269 CYP2T1P-201ENST00000432607 1285 ntBASIC21.74■■□□□ 1.07
VPS16Q9H269 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
VPS16Q9H269 RARRES2P6-201ENST00000567333 442 ntBASIC21.74■■□□□ 1.07
VPS16Q9H269 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.74■■□□□ 1.07
VPS16Q9H269 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.74■■□□□ 1.07
VPS16Q9H269 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS16Q9H269 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
VPS16Q9H269 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS16Q9H269 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.73■■□□□ 1.07
VPS16Q9H269 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
VPS16Q9H269 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS16Q9H269 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
VPS16Q9H269 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
VPS16Q9H269 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS16Q9H269 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS16Q9H269 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS16Q9H269 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms