Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 H19-201ENST00000411754 1788 ntTSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AC055733.4-201ENST00000638462 1354 ntBASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 TSPY13P-201ENST00000338964 914 ntBASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AC004987.1-201ENST00000428627 508 ntBASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 KRT125P-201ENST00000546827 989 ntBASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 NTF6A-201ENST00000591175 560 ntBASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AC005082.1-201ENST00000413042 2259 ntBASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 BX005040.4-201ENST00000637145 1518 ntBASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LCE3DQ9BYE3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms