Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 DBI-210ENST00000542275 757 ntTSL 5 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 AC013268.1-206ENST00000638368 961 ntBASIC11.79□□□□□ -0.52
LIMD2Q9BT23 AC112229.1-201ENST00000639295 961 ntBASIC11.79□□□□□ -0.52
LIMD2Q9BT23 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 CASP6-205ENST00000505486 538 ntTSL 4 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 AL162412.1-201ENST00000567129 965 ntBASIC11.78□□□□□ -0.52
LIMD2Q9BT23 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 AL591742.1-201ENST00000604433 565 ntBASIC11.78□□□□□ -0.52
LIMD2Q9BT23 MIR5787-201ENST00000611784 55 ntBASIC11.78□□□□□ -0.52
LIMD2Q9BT23 TFG-210ENST00000620299 1289 ntTSL 5 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LIMD2Q9BT23 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LIMD2Q9BT23 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 BMP1-204ENST00000397814 836 ntTSL 4 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 AC091799.1-201ENST00000422823 811 ntBASIC11.77□□□□□ -0.53
LIMD2Q9BT23 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 AC010536.3-201ENST00000620306 533 ntBASIC11.77□□□□□ -0.53
LIMD2Q9BT23 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 FEM1AP1-201ENST00000431297 1995 ntBASIC11.77□□□□□ -0.53
LIMD2Q9BT23 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LIMD2Q9BT23 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms