Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SETD9Q8NE22 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SETD9Q8NE22 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 FAM21FP-204ENST00000608637 956 ntBASIC18.19■□□□□ 0.5
SETD9Q8NE22 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SETD9Q8NE22 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SETD9Q8NE22 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SETD9Q8NE22 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SETD9Q8NE22 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.18■□□□□ 0.5
SETD9Q8NE22 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SETD9Q8NE22 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.18■□□□□ 0.5
SETD9Q8NE22 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SETD9Q8NE22 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SETD9Q8NE22 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SETD9Q8NE22 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 MIR4767-201ENST00000582827 78 ntBASIC18.17■□□□□ 0.5
SETD9Q8NE22 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.17■□□□□ 0.5
SETD9Q8NE22 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SETD9Q8NE22 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SETD9Q8NE22 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SETD9Q8NE22 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.16■□□□□ 0.5
SETD9Q8NE22 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.16■□□□□ 0.5
SETD9Q8NE22 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SETD9Q8NE22 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SETD9Q8NE22 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SETD9Q8NE22 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SETD9Q8NE22 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms