Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.69■□□□□ 0.58
LPCAT4Q643R3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 RARRES2P11-201ENST00000635158 484 ntBASIC18.69■□□□□ 0.58
LPCAT4Q643R3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LPCAT4Q643R3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.68■□□□□ 0.58
LPCAT4Q643R3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 AC005224.4-201ENST00000583262 1652 ntBASIC18.67■□□□□ 0.58
LPCAT4Q643R3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LPCAT4Q643R3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 UNC93B8-201ENST00000511903 705 ntBASIC18.66■□□□□ 0.58
LPCAT4Q643R3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT4Q643R3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LPCAT4Q643R3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms