Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 AC008687.6-201ENST00000596318 630 ntBASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA1Q5Y7H0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 ESRRAP1-201ENST00000400596 1257 ntBASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 AC026366.1-201ENST00000488803 879 ntBASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA1Q5Y7H0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 KRT17P3-201ENST00000420566 1262 ntBASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA1Q5Y7H0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 BX119927.1-201ENST00000636596 1552 ntBASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 AC120498.8-201ENST00000614275 531 ntBASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 AL162377.1-201ENST00000618844 1793 ntBASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQA1Q5Y7H0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQA1Q5Y7H0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms