Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LSM3P62310 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LSM3P62310 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.87■□□□□ 0.45
LSM3P62310 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.87■□□□□ 0.45
LSM3P62310 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.87■□□□□ 0.45
LSM3P62310 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LSM3P62310 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 AP004607.4-201ENST00000530158 1459 ntBASIC17.87■□□□□ 0.45
LSM3P62310 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.87■□□□□ 0.45
LSM3P62310 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM3P62310 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.87■□□□□ 0.45
LSM3P62310 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LSM3P62310 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LSM3P62310 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
LSM3P62310 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM3P62310 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM3P62310 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM3P62310 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM3P62310 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM3P62310 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM3P62310 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 AC061975.6-201ENST00000579045 1553 ntBASIC17.86■□□□□ 0.45
LSM3P62310 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.86■□□□□ 0.45
LSM3P62310 CROCCP3-202ENST00000420820 1947 ntBASIC17.86■□□□□ 0.45
LSM3P62310 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM3P62310 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.85■□□□□ 0.45
LSM3P62310 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.85■□□□□ 0.45
LSM3P62310 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.85■□□□□ 0.45
LSM3P62310 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.85■□□□□ 0.45
LSM3P62310 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.85■□□□□ 0.45
LSM3P62310 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.85■□□□□ 0.45
LSM3P62310 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.85■□□□□ 0.45
LSM3P62310 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LSM3P62310 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LSM3P62310 SYT6-210ENST00000641643 1587 ntBASIC17.85■□□□□ 0.45
LSM3P62310 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM3P62310 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.85■□□□□ 0.45
LSM3P62310 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LSM3P62310 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM3P62310 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM3P62310 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LSM3P62310 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LSM3P62310 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LSM3P62310 AC106820.2-201ENST00000563775 3264 ntBASIC17.84■□□□□ 0.45
LSM3P62310 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.84■□□□□ 0.45
LSM3P62310 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.84■□□□□ 0.45
LSM3P62310 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.84■□□□□ 0.45
LSM3P62310 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.84■□□□□ 0.45
LSM3P62310 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.84■□□□□ 0.45
LSM3P62310 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSM3P62310 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM3P62310 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM3P62310 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms