Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NR4A1P22736 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.36■□□□□ 0.53
NR4A1P22736 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.36■□□□□ 0.53
NR4A1P22736 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NR4A1P22736 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.36■□□□□ 0.53
NR4A1P22736 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.36■□□□□ 0.53
NR4A1P22736 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NR4A1P22736 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NR4A1P22736 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR4A1P22736 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.35■□□□□ 0.53
NR4A1P22736 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.35■□□□□ 0.53
NR4A1P22736 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NR4A1P22736 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
NR4A1P22736 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NR4A1P22736 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NR4A1P22736 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.35■□□□□ 0.53
NR4A1P22736 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.35■□□□□ 0.53
NR4A1P22736 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NR4A1P22736 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NR4A1P22736 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NR4A1P22736 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.35■□□□□ 0.53
NR4A1P22736 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR4A1P22736 AC092720.2-201ENST00000602388 1665 ntBASIC18.34■□□□□ 0.53
NR4A1P22736 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NR4A1P22736 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NR4A1P22736 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NR4A1P22736 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.34■□□□□ 0.53
NR4A1P22736 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.34■□□□□ 0.53
NR4A1P22736 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.34■□□□□ 0.53
NR4A1P22736 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.34■□□□□ 0.53
NR4A1P22736 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.34■□□□□ 0.53
NR4A1P22736 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 AC104187.1-201ENST00000607510 612 ntBASIC18.34■□□□□ 0.53
NR4A1P22736 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NR4A1P22736 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NR4A1P22736 AIRN-201ENST00000601203 4374 ntBASIC18.34■□□□□ 0.53
NR4A1P22736 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NR4A1P22736 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR4A1P22736 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR4A1P22736 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR4A1P22736 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NR4A1P22736 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NR4A1P22736 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.33■□□□□ 0.53
NR4A1P22736 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.33■□□□□ 0.53
NR4A1P22736 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR4A1P22736 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR4A1P22736 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR4A1P22736 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
NR4A1P22736 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.33■□□□□ 0.53
NR4A1P22736 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.33■□□□□ 0.52
NR4A1P22736 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.33■□□□□ 0.52
NR4A1P22736 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR4A1P22736 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.33■□□□□ 0.52
NR4A1P22736 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.33■□□□□ 0.52
NR4A1P22736 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NR4A1P22736 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR4A1P22736 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
NR4A1P22736 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR4A1P22736 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NR4A1P22736 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms