Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
APOA1P02647 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA1P02647 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA1P02647 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
APOA1P02647 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.67■□□□□ 0.42
APOA1P02647 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA1P02647 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.67■□□□□ 0.42
APOA1P02647 PCDHB18P-201ENST00000524813 2368 ntBASIC17.67■□□□□ 0.42
APOA1P02647 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
APOA1P02647 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.67■□□□□ 0.42
APOA1P02647 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA1P02647 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.67■□□□□ 0.42
APOA1P02647 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.67■□□□□ 0.42
APOA1P02647 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOA1P02647 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.67■□□□□ 0.42
APOA1P02647 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
APOA1P02647 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA1P02647 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
APOA1P02647 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
APOA1P02647 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA1P02647 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA1P02647 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APOA1P02647 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 AC018470.1-201ENST00000624790 3129 ntBASIC17.66■□□□□ 0.42
APOA1P02647 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA1P02647 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
APOA1P02647 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
APOA1P02647 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.66■□□□□ 0.42
APOA1P02647 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 AC092171.4-201ENST00000609130 632 ntBASIC17.66■□□□□ 0.42
APOA1P02647 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.66■□□□□ 0.42
APOA1P02647 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA1P02647 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
APOA1P02647 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA1P02647 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA1P02647 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
APOA1P02647 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.65■□□□□ 0.42
APOA1P02647 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.65■□□□□ 0.42
APOA1P02647 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.65■□□□□ 0.42
APOA1P02647 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.65■□□□□ 0.42
APOA1P02647 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.65■□□□□ 0.42
APOA1P02647 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.65■□□□□ 0.42
APOA1P02647 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.65■□□□□ 0.42
APOA1P02647 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOA1P02647 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
APOA1P02647 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.64■□□□□ 0.42
APOA1P02647 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
APOA1P02647 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
APOA1P02647 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOA1P02647 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
APOA1P02647 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.64■□□□□ 0.41
APOA1P02647 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.64■□□□□ 0.41
APOA1P02647 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.64■□□□□ 0.41
APOA1P02647 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOA1P02647 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOA1P02647 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOA1P02647 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOA1P02647 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.64■□□□□ 0.41
APOA1P02647 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.64■□□□□ 0.41
APOA1P02647 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.64■□□□□ 0.41
APOA1P02647 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.64■□□□□ 0.41
APOA1P02647 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
APOA1P02647 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms