Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.64■□□□□ 0.89
MSI1O43347 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.64■□□□□ 0.89
MSI1O43347 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.64■□□□□ 0.89
MSI1O43347 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.64■□□□□ 0.89
MSI1O43347 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.64■□□□□ 0.89
MSI1O43347 AC066615.1-201ENST00000640911 628 ntBASIC20.64■□□□□ 0.89
MSI1O43347 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.64■□□□□ 0.89
MSI1O43347 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.64■□□□□ 0.89
MSI1O43347 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.63■□□□□ 0.89
MSI1O43347 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.63■□□□□ 0.89
MSI1O43347 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.63■□□□□ 0.89
MSI1O43347 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MSI1O43347 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
MSI1O43347 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.63■□□□□ 0.89
MSI1O43347 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.63■□□□□ 0.89
MSI1O43347 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.63■□□□□ 0.89
MSI1O43347 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.63■□□□□ 0.89
MSI1O43347 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.63■□□□□ 0.89
MSI1O43347 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MSI1O43347 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.63■□□□□ 0.89
MSI1O43347 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.63■□□□□ 0.89
MSI1O43347 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.63■□□□□ 0.89
MSI1O43347 AL691432.2-201ENST00000607222 2038 ntBASIC20.63■□□□□ 0.89
MSI1O43347 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSI1O43347 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.62■□□□□ 0.89
MSI1O43347 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.62■□□□□ 0.89
MSI1O43347 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.62■□□□□ 0.89
MSI1O43347 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.62■□□□□ 0.89
MSI1O43347 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.62■□□□□ 0.89
MSI1O43347 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.62■□□□□ 0.89
MSI1O43347 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.62■□□□□ 0.89
MSI1O43347 PRKY-204ENST00000533551 1019 ntBASIC20.62■□□□□ 0.89
MSI1O43347 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
MSI1O43347 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.62■□□□□ 0.89
MSI1O43347 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MSI1O43347 PHGDH-210ENST00000641115 1638 ntBASIC20.62■□□□□ 0.89
MSI1O43347 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 LINC01521-201ENST00000504184 1943 ntBASIC20.62■□□□□ 0.89
MSI1O43347 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSI1O43347 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MSI1O43347 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.61■□□□□ 0.89
MSI1O43347 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MSI1O43347 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.61■□□□□ 0.89
MSI1O43347 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.61■□□□□ 0.89
MSI1O43347 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.61■□□□□ 0.89
MSI1O43347 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.61■□□□□ 0.89
MSI1O43347 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
MSI1O43347 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MSI1O43347 AC018553.1-201ENST00000616682 1458 ntBASIC20.61■□□□□ 0.89
MSI1O43347 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MSI1O43347 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSI1O43347 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 AC116351.2-201ENST00000606540 1585 ntBASIC20.6■□□□□ 0.89
MSI1O43347 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms