Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 AC091305.1-201ENST00000479476 895 ntBASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 AC061975.6-201ENST00000579045 1553 ntBASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 BX119927.1-201ENST00000636596 1552 ntBASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 AL049812.1-201ENST00000432563 2267 ntBASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IGKV2-28A0A075B6P5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV2-28A0A075B6P5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IGKV2-28A0A075B6P5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IGKV2-28A0A075B6P5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IGKV2-28A0A075B6P5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.08□□□□□ -0.31
IGKV2-28A0A075B6P5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.08□□□□□ -0.31
IGKV2-28A0A075B6P5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV2-28A0A075B6P5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms