Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PCDHGB3Q9Y5G1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 AC087289.5-201ENST00000586076 3175 ntBASIC18.83■□□□□ 0.6
PCDHGB3Q9Y5G1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 AC069152.1-201ENST00000438030 544 ntBASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 MIR4758-201ENST00000577688 71 ntBASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB3Q9Y5G1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 BX323043.1-201ENST00000641006 1765 ntBASIC18.81■□□□□ 0.6
PCDHGB3Q9Y5G1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 AC116562.4-201ENST00000641316 2276 ntBASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB3Q9Y5G1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms