Protein–RNA interactions for Protein: Q9UBB5

MBD2, Methyl-CpG-binding domain protein 2, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2Q9UBB5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.63■□□□□ 0.25
MBD2Q9UBB5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 ATP5G2P3-201ENST00000429083 425 ntBASIC16.63■□□□□ 0.25
MBD2Q9UBB5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 AC103834.1-201ENST00000520383 144 ntBASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 MTDHP2-201ENST00000601468 714 ntBASIC16.63■□□□□ 0.25
MBD2Q9UBB5 AL117332.1-201ENST00000622628 974 ntBASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD2Q9UBB5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 TREX1-205ENST00000625293 1783 ntBASIC16.62■□□□□ 0.25
MBD2Q9UBB5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 AC004987.1-201ENST00000428627 508 ntBASIC16.62■□□□□ 0.25
MBD2Q9UBB5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD2Q9UBB5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 AC011270.2-201ENST00000624293 2550 ntBASIC16.61■□□□□ 0.25
MBD2Q9UBB5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 BX664725.1-201ENST00000438252 379 ntBASIC16.61■□□□□ 0.25
MBD2Q9UBB5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 AC010525.1-201ENST00000585559 441 ntBASIC16.61■□□□□ 0.25
MBD2Q9UBB5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD2Q9UBB5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 FZD10-202ENST00000539839 3282 ntBASIC16.6■□□□□ 0.25
MBD2Q9UBB5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
MBD2Q9UBB5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms