Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
CDC42SE1Q9NRR8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CDC42SE1Q9NRR8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 AC067852.2-201ENST00000590513 2313 ntBASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 AL136379.1-201ENST00000623471 2642 ntBASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CDC42SE1Q9NRR8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 FLJ38576-201ENST00000623820 2459 ntBASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 FLJ16779-201ENST00000612722 7638 ntBASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CDC42SE1Q9NRR8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms