Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.98□□□□□ -0.01
SSBP4Q9BWG4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 MIR4767-201ENST00000582827 78 ntBASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 Z82202.1-201ENST00000623446 1880 ntBASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP4Q9BWG4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 AC018470.1-201ENST00000624790 3129 ntBASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 AC061975.6-201ENST00000579045 1553 ntBASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 AC105233.4-201ENST00000642045 216 ntBASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP4Q9BWG4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP4Q9BWG4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP4Q9BWG4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.96□□□□□ -0.02
SSBP4Q9BWG4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP4Q9BWG4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 AL356441.2-201ENST00000443009 864 ntBASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 AC131281.2-201ENST00000520478 145 ntBASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP4Q9BWG4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 AL691432.2-201ENST00000607222 2038 ntBASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP4Q9BWG4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms