Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NICN1Q9BSH3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NICN1Q9BSH3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 KRT18P14-201ENST00000534205 1250 ntBASIC17.03■□□□□ 0.32
NICN1Q9BSH3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NICN1Q9BSH3 TNXA-203ENST00000507684 2038 ntBASIC17.03■□□□□ 0.32
NICN1Q9BSH3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 YBX1P1-201ENST00000445822 960 ntBASIC17.02■□□□□ 0.32
NICN1Q9BSH3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NICN1Q9BSH3 AL356652.1-201ENST00000615962 565 ntBASIC17.02■□□□□ 0.32
NICN1Q9BSH3 AC004408.2-201ENST00000623613 2777 ntBASIC17.02■□□□□ 0.31
NICN1Q9BSH3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NICN1Q9BSH3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 UBE2DNL-204ENST00000602536 740 ntBASIC17.01■□□□□ 0.31
NICN1Q9BSH3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NICN1Q9BSH3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17■□□□□ 0.31
NICN1Q9BSH3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17■□□□□ 0.31
NICN1Q9BSH3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17■□□□□ 0.31
NICN1Q9BSH3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17■□□□□ 0.31
NICN1Q9BSH3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NICN1Q9BSH3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms