Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIGMAR1Q99720 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SIGMAR1Q99720 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SIGMAR1Q99720 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.33□□□□□ -0.27
SIGMAR1Q99720 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SIGMAR1Q99720 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SIGMAR1Q99720 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 MLEC-202ENST00000412616 841 ntTSL 3 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIGMAR1Q99720 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIGMAR1Q99720 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIGMAR1Q99720 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIGMAR1Q99720 AC009113.1-201ENST00000570267 2443 ntBASIC13.31□□□□□ -0.28
SIGMAR1Q99720 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SIGMAR1Q99720 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIGMAR1Q99720 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIGMAR1Q99720 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SIGMAR1Q99720 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SIGMAR1Q99720 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms