Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.84■□□□□ 0.45
PTP4A1Q93096 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
PTP4A1Q93096 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A1Q93096 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.83■□□□□ 0.45
PTP4A1Q93096 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.83■□□□□ 0.45
PTP4A1Q93096 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A1Q93096 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PTP4A1Q93096 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
PTP4A1Q93096 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A1Q93096 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 AC007322.4-201ENST00000509611 723 ntBASIC17.82■□□□□ 0.44
PTP4A1Q93096 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 AC011767.1-201ENST00000617410 1153 ntBASIC17.82■□□□□ 0.44
PTP4A1Q93096 BID-214ENST00000617586 542 ntTSL 5 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 Z82202.1-201ENST00000623446 1880 ntBASIC17.82■□□□□ 0.44
PTP4A1Q93096 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A1Q93096 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.82■□□□□ 0.44
PTP4A1Q93096 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PTP4A1Q93096 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms