Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.4■■□□□ 1.5
SLX4Q8IY92 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLX4Q8IY92 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.4■■□□□ 1.5
SLX4Q8IY92 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLX4Q8IY92 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLX4Q8IY92 KRT18P56-201ENST00000507275 550 ntBASIC24.4■■□□□ 1.5
SLX4Q8IY92 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SLX4Q8IY92 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.4■■□□□ 1.5
SLX4Q8IY92 AP000550.4-202ENST00000639755 178 ntBASIC24.4■■□□□ 1.5
SLX4Q8IY92 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLX4Q8IY92 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLX4Q8IY92 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLX4Q8IY92 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLX4Q8IY92 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.39■■□□□ 1.49
SLX4Q8IY92 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.39■■□□□ 1.49
SLX4Q8IY92 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.39■■□□□ 1.49
SLX4Q8IY92 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.39■■□□□ 1.49
SLX4Q8IY92 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
SLX4Q8IY92 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLX4Q8IY92 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLX4Q8IY92 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLX4Q8IY92 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLX4Q8IY92 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
SLX4Q8IY92 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.39■■□□□ 1.49
SLX4Q8IY92 AL024507.2-201ENST00000606070 2574 ntBASIC24.38■■□□□ 1.49
SLX4Q8IY92 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLX4Q8IY92 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLX4Q8IY92 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLX4Q8IY92 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLX4Q8IY92 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLX4Q8IY92 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 KRT18P16-201ENST00000510337 1294 ntBASIC24.38■■□□□ 1.49
SLX4Q8IY92 SLC25A1P4-201ENST00000567977 778 ntBASIC24.38■■□□□ 1.49
SLX4Q8IY92 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.38■■□□□ 1.49
SLX4Q8IY92 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLX4Q8IY92 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLX4Q8IY92 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLX4Q8IY92 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLX4Q8IY92 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLX4Q8IY92 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 AC139887.4-201ENST00000607877 719 ntBASIC24.37■■□□□ 1.49
SLX4Q8IY92 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLX4Q8IY92 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.37■■□□□ 1.49
SLX4Q8IY92 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLX4Q8IY92 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 AC096733.2-201ENST00000609937 1394 ntBASIC24.36■■□□□ 1.49
SLX4Q8IY92 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 AC007663.1-201ENST00000438948 1240 ntBASIC24.36■■□□□ 1.49
SLX4Q8IY92 AC009947.2-201ENST00000444014 672 ntBASIC24.36■■□□□ 1.49
SLX4Q8IY92 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SLX4Q8IY92 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLX4Q8IY92 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLX4Q8IY92 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SLX4Q8IY92 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.35■■□□□ 1.49
SLX4Q8IY92 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.35■■□□□ 1.49
SLX4Q8IY92 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLX4Q8IY92 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.35■■□□□ 1.49
SLX4Q8IY92 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.35■■□□□ 1.49
SLX4Q8IY92 TFP1-202ENST00000475455 1573 ntBASIC24.35■■□□□ 1.49
SLX4Q8IY92 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLX4Q8IY92 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLX4Q8IY92 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLX4Q8IY92 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.35■■□□□ 1.49
SLX4Q8IY92 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SLX4Q8IY92 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLX4Q8IY92 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.35■■□□□ 1.49
SLX4Q8IY92 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.35■■□□□ 1.49
SLX4Q8IY92 AC131212.4-201ENST00000623606 975 ntBASIC24.35■■□□□ 1.49
SLX4Q8IY92 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLX4Q8IY92 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLX4Q8IY92 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms