Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 AL139246.5-201ENST00000606645 996 ntBASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 AC005224.4-201ENST00000583262 1652 ntBASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFI1BQ5VTD9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.52■□□□□ 0.08
GFI1BQ5VTD9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
GFI1BQ5VTD9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 SUDS3P1-201ENST00000505831 966 ntBASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFI1BQ5VTD9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 AC007225.1-201ENST00000566331 1836 ntBASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 AL138781.2-201ENST00000617896 1843 ntBASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 AL139384.1-201ENST00000612143 3047 ntBASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFI1BQ5VTD9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms