Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNCAP37840 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNCAP37840 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SNCAP37840 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNCAP37840 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNCAP37840 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.32■□□□□ 0.2
SNCAP37840 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SNCAP37840 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNCAP37840 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SNCAP37840 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
SNCAP37840 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
SNCAP37840 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.32■□□□□ 0.2
SNCAP37840 KRT16P2-201ENST00000414673 1423 ntBASIC16.32■□□□□ 0.2
SNCAP37840 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.32■□□□□ 0.2
SNCAP37840 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.32■□□□□ 0.2
SNCAP37840 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.32■□□□□ 0.2
SNCAP37840 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCAP37840 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNCAP37840 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SNCAP37840 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.31■□□□□ 0.2
SNCAP37840 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.31■□□□□ 0.2
SNCAP37840 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SNCAP37840 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.31■□□□□ 0.2
SNCAP37840 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.31■□□□□ 0.2
SNCAP37840 SUDS3P1-201ENST00000505831 966 ntBASIC16.31■□□□□ 0.2
SNCAP37840 AL139246.5-201ENST00000606645 996 ntBASIC16.31■□□□□ 0.2
SNCAP37840 AL031432.3-201ENST00000607698 485 ntBASIC16.31■□□□□ 0.2
SNCAP37840 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCAP37840 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SNCAP37840 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SNCAP37840 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.31■□□□□ 0.2
SNCAP37840 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.3■□□□□ 0.2
SNCAP37840 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SNCAP37840 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNCAP37840 AC007613.1-201ENST00000572811 2597 ntBASIC16.3■□□□□ 0.2
SNCAP37840 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.3■□□□□ 0.2
SNCAP37840 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.3■□□□□ 0.2
SNCAP37840 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.3■□□□□ 0.2
SNCAP37840 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNCAP37840 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.3■□□□□ 0.2
SNCAP37840 AC138907.5-202ENST00000569484 235 ntBASIC16.3■□□□□ 0.2
SNCAP37840 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNCAP37840 MIR6084-201ENST00000622012 110 ntBASIC16.3■□□□□ 0.2
SNCAP37840 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.3■□□□□ 0.2
SNCAP37840 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNCAP37840 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNCAP37840 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNCAP37840 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SNCAP37840 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.3■□□□□ 0.2
SNCAP37840 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNCAP37840 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.3■□□□□ 0.2
SNCAP37840 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNCAP37840 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.29■□□□□ 0.2
SNCAP37840 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNCAP37840 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.29■□□□□ 0.2
SNCAP37840 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
SNCAP37840 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNCAP37840 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SNCAP37840 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.29■□□□□ 0.2
SNCAP37840 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SNCAP37840 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCAP37840 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms