Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AP000692.2-201ENST00000608391 879 ntBASIC26.37■■□□□ 1.81
COL5A2P05997 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC26.37■■□□□ 1.81
COL5A2P05997 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL5A2P05997 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL5A2P05997 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.37■■□□□ 1.81
COL5A2P05997 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL5A2P05997 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
COL5A2P05997 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL5A2P05997 AL024507.2-201ENST00000606070 2574 ntBASIC26.37■■□□□ 1.81
COL5A2P05997 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
COL5A2P05997 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
COL5A2P05997 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 AL049796.1-201ENST00000565336 1766 ntBASIC26.36■■□□□ 1.81
COL5A2P05997 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.36■■□□□ 1.81
COL5A2P05997 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
COL5A2P05997 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
COL5A2P05997 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL5A2P05997 HIST1H2APS4-201ENST00000362070 348 ntBASIC26.36■■□□□ 1.81
COL5A2P05997 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
COL5A2P05997 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
COL5A2P05997 AC131212.4-201ENST00000623606 975 ntBASIC26.36■■□□□ 1.81
COL5A2P05997 AC121338.2-201ENST00000622535 1744 ntBASIC26.36■■□□□ 1.81
COL5A2P05997 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
COL5A2P05997 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
COL5A2P05997 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC26.35■■□□□ 1.81
COL5A2P05997 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.35■■□□□ 1.81
COL5A2P05997 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 CLN6-204ENST00000564752 900 ntTSL 3 BASIC26.35■■□□□ 1.81
COL5A2P05997 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL5A2P05997 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.34■■□□□ 1.81
COL5A2P05997 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL5A2P05997 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL5A2P05997 RNF152P1-201ENST00000397754 604 ntBASIC26.34■■□□□ 1.81
COL5A2P05997 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
COL5A2P05997 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC26.34■■□□□ 1.81
COL5A2P05997 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC26.34■■□□□ 1.81
COL5A2P05997 SLC25A1P4-201ENST00000567977 778 ntBASIC26.34■■□□□ 1.81
COL5A2P05997 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC26.34■■□□□ 1.81
COL5A2P05997 AP000550.4-202ENST00000639755 178 ntBASIC26.34■■□□□ 1.81
COL5A2P05997 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
COL5A2P05997 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL5A2P05997 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 MFAP1P1-201ENST00000442257 1255 ntBASIC26.33■■□□□ 1.81
COL5A2P05997 AC008040.2-201ENST00000461049 708 ntBASIC26.33■■□□□ 1.81
COL5A2P05997 KRT18P56-201ENST00000507275 550 ntBASIC26.33■■□□□ 1.81
COL5A2P05997 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
COL5A2P05997 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC26.33■■□□□ 1.81
COL5A2P05997 AC011298.2-201ENST00000617989 482 ntBASIC26.33■■□□□ 1.81
COL5A2P05997 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.33■■□□□ 1.81
COL5A2P05997 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.33■■□□□ 1.81
COL5A2P05997 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL5A2P05997 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
COL5A2P05997 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
COL5A2P05997 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.32■■□□□ 1.8
COL5A2P05997 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
COL5A2P05997 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.32■■□□□ 1.8
COL5A2P05997 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC26.32■■□□□ 1.8
COL5A2P05997 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC26.32■■□□□ 1.8
COL5A2P05997 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC26.32■■□□□ 1.8
COL5A2P05997 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC26.32■■□□□ 1.8
COL5A2P05997 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.32■■□□□ 1.8
COL5A2P05997 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC26.32■■□□□ 1.8
COL5A2P05997 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL5A2P05997 MED25-212ENST00000618715 1467 ntTSL 5 BASIC26.32■■□□□ 1.8
COL5A2P05997 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
COL5A2P05997 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL5A2P05997 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
COL5A2P05997 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC26.31■■□□□ 1.8
COL5A2P05997 TUBB8P6-201ENST00000436895 1288 ntBASIC26.31■■□□□ 1.8
COL5A2P05997 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
COL5A2P05997 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC26.31■■□□□ 1.8
COL5A2P05997 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL5A2P05997 HLA-A-209ENST00000638375 975 ntBASIC26.31■■□□□ 1.8
COL5A2P05997 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms