Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LMNAP02545 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LMNAP02545 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 MMP23A-201ENST00000234610 1017 ntBASIC20.7■□□□□ 0.9
LMNAP02545 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LMNAP02545 KRT18P68-201ENST00000392293 1000 ntBASIC20.7■□□□□ 0.9
LMNAP02545 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LMNAP02545 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.7■□□□□ 0.9
LMNAP02545 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LMNAP02545 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.7■□□□□ 0.9
LMNAP02545 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMNAP02545 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.7■□□□□ 0.9
LMNAP02545 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LMNAP02545 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
LMNAP02545 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
LMNAP02545 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
LMNAP02545 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.69■□□□□ 0.9
LMNAP02545 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.69■□□□□ 0.9
LMNAP02545 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 RARRES2P10-201ENST00000564312 460 ntBASIC20.69■□□□□ 0.9
LMNAP02545 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LMNAP02545 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNAP02545 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.69■□□□□ 0.9
LMNAP02545 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.69■□□□□ 0.9
LMNAP02545 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LMNAP02545 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.68■□□□□ 0.9
LMNAP02545 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LMNAP02545 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.68■□□□□ 0.9
LMNAP02545 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 AC005363.2-201ENST00000618631 242 ntBASIC20.68■□□□□ 0.9
LMNAP02545 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNAP02545 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
LMNAP02545 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LMNAP02545 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
LMNAP02545 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.67■□□□□ 0.9
LMNAP02545 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.67■□□□□ 0.9
LMNAP02545 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.67■□□□□ 0.9
LMNAP02545 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.67■□□□□ 0.9
LMNAP02545 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.67■□□□□ 0.9
LMNAP02545 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LMNAP02545 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LMNAP02545 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LMNAP02545 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.67■□□□□ 0.9
LMNAP02545 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNAP02545 LINC01960-201ENST00000563759 1884 ntBASIC20.67■□□□□ 0.9
LMNAP02545 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMNAP02545 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNAP02545 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNAP02545 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LMNAP02545 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNAP02545 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.66■□□□□ 0.9
LMNAP02545 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.66■□□□□ 0.9
LMNAP02545 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.66■□□□□ 0.9
LMNAP02545 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.66■□□□□ 0.9
LMNAP02545 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNAP02545 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms