Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 AL356740.2-201ENST00000601559 647 ntBASIC14.96□□□□□ -0.01
HLA-DQA1P01909 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.96□□□□□ -0.02
HLA-DQA1P01909 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA1P01909 PCDHB18P-201ENST00000524813 2368 ntBASIC14.96□□□□□ -0.02
HLA-DQA1P01909 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA1P01909 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA1P01909 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA1P01909 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA1P01909 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 AL691432.2-201ENST00000607222 2038 ntBASIC14.94□□□□□ -0.02
HLA-DQA1P01909 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 AL117332.1-201ENST00000622628 974 ntBASIC14.94□□□□□ -0.02
HLA-DQA1P01909 AC241377.3-202ENST00000626088 1088 ntBASIC14.94□□□□□ -0.02
HLA-DQA1P01909 AC241585.3-202ENST00000628937 1088 ntBASIC14.94□□□□□ -0.02
HLA-DQA1P01909 AC245100.8-202ENST00000629247 1058 ntBASIC14.94□□□□□ -0.02
HLA-DQA1P01909 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA1P01909 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 AC135050.7-201ENST00000624508 2218 ntBASIC14.93□□□□□ -0.02
HLA-DQA1P01909 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 OR2I1P-207ENST00000453522 948 ntBASIC14.93□□□□□ -0.02
HLA-DQA1P01909 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 AC055733.4-201ENST00000638462 1354 ntBASIC14.93□□□□□ -0.02
HLA-DQA1P01909 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA1P01909 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms