Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.41■□□□□ 0.38
KDM4BO94953 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KDM4BO94953 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KDM4BO94953 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.41■□□□□ 0.38
KDM4BO94953 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.41■□□□□ 0.38
KDM4BO94953 SLC7A5P1-201ENST00000568957 537 ntBASIC17.41■□□□□ 0.38
KDM4BO94953 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.41■□□□□ 0.38
KDM4BO94953 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KDM4BO94953 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
KDM4BO94953 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.41■□□□□ 0.38
KDM4BO94953 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KDM4BO94953 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDM4BO94953 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.4■□□□□ 0.38
KDM4BO94953 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.4■□□□□ 0.38
KDM4BO94953 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KDM4BO94953 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KDM4BO94953 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.4■□□□□ 0.38
KDM4BO94953 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 AC243732.1-201ENST00000612648 864 ntBASIC17.4■□□□□ 0.38
KDM4BO94953 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
KDM4BO94953 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDM4BO94953 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.4■□□□□ 0.38
KDM4BO94953 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
KDM4BO94953 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.39■□□□□ 0.38
KDM4BO94953 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KDM4BO94953 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KDM4BO94953 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
KDM4BO94953 AC120498.9-201ENST00000339021 3867 ntBASIC17.39■□□□□ 0.37
KDM4BO94953 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KDM4BO94953 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.39■□□□□ 0.37
KDM4BO94953 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
KDM4BO94953 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KDM4BO94953 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KDM4BO94953 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.39■□□□□ 0.37
KDM4BO94953 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KDM4BO94953 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KDM4BO94953 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM4BO94953 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.38■□□□□ 0.37
KDM4BO94953 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KDM4BO94953 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.38■□□□□ 0.37
KDM4BO94953 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.38■□□□□ 0.37
KDM4BO94953 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.38■□□□□ 0.37
KDM4BO94953 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KDM4BO94953 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.38■□□□□ 0.37
KDM4BO94953 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.38■□□□□ 0.37
KDM4BO94953 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.38■□□□□ 0.37
KDM4BO94953 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM4BO94953 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms