Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SYNPO2Q9UMS6 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNPO2Q9UMS6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SYNPO2Q9UMS6 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNPO2Q9UMS6 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNPO2Q9UMS6 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 HMGB1P32-201ENST00000425971 565 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC099340.1-201ENST00000475247 599 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC010442.1-201ENST00000515583 816 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 RN7SKP196-201ENST00000516267 345 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AL035410.2-201ENST00000604963 864 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC018690.1-201ENST00000608144 626 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 CLUHP10-201ENST00000631979 980 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC116631.1-202ENST00000640984 683 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 DLEU2L-201ENST00000371086 3555 ntBASIC8□□□□□ -1.13
SYNPO2Q9UMS6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNPO2Q9UMS6 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AL008638.3-201ENST00000623027 5182 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC074141.1-201ENST00000588129 2995 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 RNA5SP474-201ENST00000391234 90 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 RN7SKP205-201ENST00000410999 307 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 GAPDHP19-201ENST00000431768 1005 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AK3P5-201ENST00000432033 519 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 BX119917.1-201ENST00000432517 502 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 MEF2AP1-201ENST00000454867 863 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 SSX8-201ENST00000506270 579 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 PABPC1P1-201ENST00000506347 591 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 SNX18P23-201ENST00000510867 677 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 IGKV2D-38-201ENST00000518423 240 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AL365223.1-201ENST00000574864 1297 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 AP005131.7-201ENST00000610087 611 ntBASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNPO2Q9UMS6 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms